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Institut Charles Sadron

Institut Charles Sadron MCUBE

Publications




2023

Sharma, V.; Fessler, F.; Thalmann, F.; Marques, C.M.; Stocco, A.
Rotational and translational drags of a Janus particle close to a wall and a lipid membrane
Dans : Journal Of Colloid And Interface Science,652(B) : 2159-2166 (2023)
Article de journal



2022

Ruiz, P.A.S.; Ziebert, F.; Kulic, I.M.
Physics of self-rolling viruses
Dans : Physical Review E,105(5) : (2022)
Article de journal
Zhang, Y.; Liu, D.; Zhang, Y.; Guo, Y.; Li, W.; Thalmann, F.
Coarse-grained description of monounsaturated peroxidized phospholipid bilayers
Dans : Journal Of Chemical Physics,157(8) : (2022)
Article de journal
Walzel, F.; Requier, A.; Boschi, K.; Farago, J.; Fuchs, P.; Thalmann, F.; Drenckhan, W.; Muller, P.; Charitat, T.
Perturbing the catenoid: Stability and mechanical properties of nonaxisymmetric minimal surfaces
Dans : Physical Review E,106(1) : (2022)
Article de journal



2021

Benazieb, O.; Loison, C.; Thalmann, F.
Rheology of sliding leaflets in coarse-grained DSPC lipid bilayers
Dans : Physical Review E,104(5) : (2021)
Article de journal
Walter, V.; Ruscher, C.; Gola, A.; Marques, C.M.; Benzerara, O.; Thalmann, F.
Ripple-like instability in the simulated gel phase of finite size phosphocholine bilayers
Dans : Biochimica Et Biophysica Acta-Biomembranes,1863(11) : (2021)
Article de journal
Junqueira, H.; Schroder, A.P.; Thalmann, F.; Klymchenko, A.; Mely, Y.; Baptista, M.S.; Marques, C.M.
Molecular organization in hydroperoxidized POPC bilayers
Dans : Biochimica Et Biophysica Acta-Biomembranes,1863(10) : (2021)
Article de journal
Ziebert, F.; Kulic, I.M.
How Influenza’s Spike Motor Works
Dans : Physical Review Letters,126(21) : (2021)
Article de journal
Walter, V.; Ruscher, C.; Benzerara, O.; Thalmann, F.
MLLPA: A Machine Learning-assisted Python module to study phase-specific events in lipid membranes
Dans : Journal Of Computational Chemistry,42(13) : 930-943 (2021)
Article de journal
Morandi, I.M.; Kluzek, M.; Wolff, J.; Schroder, A.; Thalmann, F.; Marques, C.M.
Accumulation of styrene oligomers alters lipid membrane phase order and miscibility
Dans : Proceedings Of The National Academy Of Sciences Of The United States Of America,118(4) : (2021)
Article de journal
Vagner, S.A.; Patlazhan, S.A.; Serra, C.A.; Funfschilling, D.; Kulichikhin, V.G.
Dripping and jetting of semi-dilute polymer solutions co-flowing in co-axial capillaries
Dans : Physics Of Fluids,33(6) : (2021)
Article de journal



2020

Cuveillier, C.; Delaroche, J.; Seggio, M.; Gory-Faure, S.; Bosc, C.; Denarier, E.; Bacia, M.; Schoehn, G.; Mohrbach, H.; Kulic, I.; Andrieux, A.; Arnal, I.; Delphin, C.
MAP6 is an intraluminal protein that induces neuronal microtubules to coil
Dans : Science Advances,6(14) : eaaz4344 (2020)
Article de journal
Walter, V.; Ruscher, C.; Benzerara, O.; Marques, C.M.; Thalmann, F.
A machine learning study of the two states model for lipid bilayer phase transitions
Dans : Physical Chemistry Chemical Physics,22(34) : 19147-19154 (2020)
Article de journal
Benedetti, F.; Fu, L.; Thalmann, F.; Charitat, T.; Rubin, A.; Loison, C.
Coarse-Grain Simulations of Solid Supported Lipid Bilayers with Varying Hydration Levels
Dans : Journal Of Physical Chemistry B,124(38) : 8287-8298 (2020)
Article de journal
Farago, J.; Charitat, T.; Bigot, A.; Schotter, R.; Kulic, I.
Counterrotation of magnetic beads in spinning fields
Dans : Physical Review E,102(4) : (2020)
Article de journal
de Oliveira, T.E.; Leonforte, F.; Nicolas-Morgantini, L.; Fameau, A.-L.; Querleux, B.; Thalmann, F.; Marques, C.M.
Fluid bilayer phase in aqueous mixtures of fatty alcohol and cationic surfactant
Dans : Physical Review Research,2(1) : (2020)
Article de journal
Bazir, A.; Baumann, A.; Ziebert, F.; Kulic, I.M.
Dynamics of fiberboids
Dans : Soft Matter,16(22) : 5210-5223 (2020)
Article de journal



2019

Su, C.-F.; Merlitz, H.; Thalmann, F.; Marques, C.; Sommer, J.-U.
Coarse-Grained Model of Oxidized Membranes and Their Interactions with Nanoparticles of Various Degrees of Hydrophobicity
Dans : Journal Of Physical Chemistry C,123(11) : 6839-6848 (2019)
Article de journal
Bouzar, L.; Mueller, M.M.; Messina, R.; Noeding, B.; Koester, S.; Mohrbach, H.; Kulic, I.M.
Helical Superstructure of Intermediate Filaments
Dans : Physical Review Letters,122(9) : (2019)
Article de journal
Cheeseman, S.; Truong, V.K.; Walter, V.; Thalmann, F.; Marques, C.M.; Hanssen, E.; Vongsvivut, J.; Tobin, M.J.; Baulin, V.A.; Juodkazis, S.; Maclaughlin, S.; Bryant, G.; Crawford, R.J.; Ivanova, E.P.
Interaction of Giant Unilamellar Vesicles with the Surface Nanostructures on Dragonfly Wings
Dans : Langmuir,35(6) : 2422-2430 (2019)
Article de journal
Morandi, M.I.; Thalmann, F.J.; Kluzek, M.; Schroder, A.P.; Marques, C.M.
DPPC Lipid Melting Transition in Concentrated Sucrose Solutions
Dans : Biophysical Journal,116(3, 1) : 79 (2019)
Article de journal



2018

Bacellar, I.O.L.; Baptista, M.S.; Junqueira, H.C.; Wainwright, M.; Thalmann, F.; Marques, C.M.; Schroder, A.P.
Permeability of DOPC bilayers under photoinduced oxidation: Sensitivity to photosensitizer
Dans : Biochimica Et Biophysica Acta-Biomembranes,1860(11) : 2366-2373 (2018)
Article de journal
Kluzek, M.; Schmutz, M.; Marques, C.M.; Thalmann, F.
Kinetic evolution of DOPC lipid bilayers exposed to alpha-cyclodextrins
Dans : Soft Matter,14(28) : 5800-5810 (2018)
Article de journal
Baumann, A.; Sanchez-Ferrer, A.; Jacomine, L.; Martinoty, P.; Le Houerou, V.; Ziebert, F.; Kulic, I.M.
Motorizing fibres with geometric zero-energy modes
Dans : Nature Materials,17(6) : 523 (2018)
Article de journal
Morandi, I.M.; Sommer, M.; Kluzek, M.; Thalmann, F.; Schroder, A.P.; Marques, C.M.
DPPC Bilayers in Solutions of High Sucrose Content
Dans : Biophysical Journal,114(9) : 2165-2173 (2018)
Article de journal
Nassar, M.; Gromer, A.; Thalmann, F.; Hebraud, P.; Holl, Y.
Velocity of lateral drying fronts in film formation by drying of colloidal dispersions. A 2D simulation
Dans : Journal Of Colloid And Interface Science,511() : 424-433 (2018)
Article de journal



2017

Nassar, M.; Gromer, A.; Favier, D.; Thalmann, F.; Hebraud, P.; Holl, Y.
Horizontal drying fronts in films of colloidal dispersions: influence of hydrostatic pressure and collective diffusion
Dans : Soft Matter,13(48) : 9162-9173 (2017)
Article de journal
Becu, L.; Basler, M.; Kulic, M.L.; Kulic, I.M.
Resonant reshaping of colloidal clusters on a current carrying wire
Dans : European Physical Journal E,40(12) : (2017)
Article de journal
Harlepp, S.; Thalmann, F.; Follain, G.; Goetz, J.G.
Hemodynamic forces can be accurately measured in vivo with optical tweezers
Dans : Molecular Biology Of The Cell,28(23, Si) : 3252-3260 (2017)
Article de journal
Kluzek, M.; Tyler, A.I.I.; Wang, S.; Chen, R.; Marques, C.M.; Thalmann, F.; Seddon, J.M.; Schmutz, M.
Influence of a pH-sensitive polymer on the structure of monoolein cubosomes
Dans : Soft Matter,13(41) : 7571-7577 (2017)
Article de journal
Malkin, A.Y.; Semakov, A.V.; Skvortsov, I.Y.; Zatonskikh, P.; Kulichikhin, V.G.; Subbotin, A.V.; Semenov, A.N.
Spinnability of Dilute Polymer Solutions
Dans : Macromolecules,50(20) : 8231-8244 (2017)
Article de journal
Weinberger, A.; Walter, V.; MacEwan, S.R.; Schmatko, T.; Muller, P.; Schroder, A.P.; Chilkoti, A.; Marques, C.M.
Cargo self-assembly rescues affinity of cell-penetrating peptides to lipid membranes
Dans : Scientific Reports,7() : (2017)
Article de journal
Gromer, A.; Thalmann, F.; Hebraud, P.; Holl, Y.
Simulation of Vertical Surfactant Distributions in Drying Latex Films
Dans : Langmuir,33(2) : 561-572 (2017)
Article de journal
Sou, I.; Okamoto, R.; Komura, S.; Wolff, J.
Coexistences of lamellar phases in ternary surfactant solutions
Dans : Soft Materials,15(4) : 272-281 (2017)
Article de journal
Kluzek, M.; Thalmann, F.; Schmutz, M.; Marques, C.
Ring and Tails: Exploring the Intimacy of Cyclodextrin - Membrane Interactions
Dans : Biophysical Journal,112(3, 1) : 223 (2017)
Article de journal



2016

Bouzar, L.; Muller, M.M.; Gosselin, P.; Kulic, I.M.; Mohrbach, H.
Squeezed helical elastica
Dans : European Physical Journal E,39(11) : (2016)
Article de journal
Wolff, J.; Komura, S.; Andelman, D.
Budding transition of asymmetric two-component lipid domains
Dans : Physical Review E,94(3) : (2016)
Article de journal
Gosselin, P.; Mohrbach, H.; Kulic, I.M.; Ziebert, F.
On complex, curved trajectories in microtubule gliding
Dans : Physica D-Nonlinear Phenomena,318() : 105-111 (2016)
Article de journal
Fierling, J.; Johner, A.; Kulic, I.M.; Mohrbach, H.; Mueller, M.M.
How bio-filaments twist membranes
Dans : Soft Matter,12(26) : 5747-5757 (2016)
Article de journal
Guo, Y.; Baulin, V.A.; Thalmann, F.
Peroxidised phospholipid bilayers: insight from coarse-grained molecular dynamics simulations
Dans : Soft Matter,12(1) : 263-271 (2016)
Article de journal
Baschnagel, J.; Meyer, H.; Wittmer, J.; Kulic, I.; Mohrbach, H.; Ziebert, F.; Nam, G.-M.; Lee, N.-K.; Johner, A.
Semiflexible Chains at Surfaces: Worm-Like Chains and beyond
Dans : Polymers,8(8) : (2016)
Article de journal



2015

Ziebert, F.; Mohrbach, H.; Kulic, I.M.
A nonequilibrium power balance relation for analyzing dissipative filament dynamics
Dans : European Physical Journal E,38(12) : 1-8 (2015)
Article de journal
Gromer, A.; Nassar, M.; Thalmann, F.; Hebraud, P.; Holl, Y.
Simulation of Latex Film Formation Using a Cell Model in Real Space: Vertical Drying
Dans : Langmuir,31(40) : 10983-10994 (2015)
Article de journal
Ziebert, F.; Mohrbach, H.; Kulic, I.M.
Why Microtubules Run in Circles: Mechanical Hysteresis of the Tubulin Lattice
Dans : Physical Review Letters,114(14) : (2015)
Article de journal
Li, Q.; Fuks, G.; Moulin, E.; Maaloum, M.; Rawiso, M.; Kulic, I.; Foy, J.T.; Giuseppone, N.
Macroscopic contraction of a gel induced by the integrated motion of light-driven molecular motors
Dans : Nature Nanotechnology,10(2) : 161-165 (2015)
Article de journal
Wolff, J.; Komura, S.; Andelman, D.
Budding of domains in mixed bilayer membranes
Dans : Physical Review E,91(1) : (2015)
Article de journal
Weysser, F.; Benzerara, O.; Johner, A.; Kulic, I.M.
Topological energy storage of work generated by nanomotors
Dans : Soft Matter,11(4) : 732-740 (2015)
Article de journal



2014

Kulic, I.M.; Kulic, M.L.
Theory of coherent van der Waals matter
Dans : Physical Review E,90(6) : (2014)
Article de journal
Fierling, J.; Mueller, M.M.; Mohrbach, H.; Johner, A.; Kulic, I.M.
Crunching biofilament rings
Dans : Epl,107(6) : (2014)
Article de journal
Fierling, J.; Mohrbach, H.; Kulic, I.; Lee, N.-K.; Johner, A.
Biofilaments as annealed semi-flexible copolymers
Dans : Epl,106(5) : (2014)
Article de journal
Johner, A.; Thalmann, F.; Baschnagel, J.; Meyer, H.; Obukhov, S.; Wittmer, J.P.
Two-dimensional polymeric liquids and polymer stars: learning from conflicting theories
Dans : Journal Of Statistical Mechanics-Theory And Experiment,() : (2014)
Article de journal
Mertins, O.; Bacellar, I.O.L.; Thalmann, F.; Marques, C.M.; Baptista, M.S.; Itri, R.
Physical Damage on Giant Vesicles Membrane as a Result of Methylene Blue Photoirradiation
Dans : Biophysical Journal,106(1) : 162-171 (2014)
Article de journal
Kahraman, O.; Mohrbach, H.; Mueller, M.M.; Kulic, I.M.
Confotronic dynamics of tubular filaments
Dans : Soft Matter,10(16) : 2836-2847 (2014)
Article de journal
Schmatko, T.; Muller, P.; Maaloum, M.
Surface charge effects on the 2D conformation of supercoiled DNA
Dans : Soft Matter,10(15) : 2520-2529 (2014)
Article de journal



2013

Kulic, I.M.; Kulic, M.L.
Self-Assembly of Colloidal Superstructures in Coherently Fluctuating Fields
Dans : Physical Review Letters,111(19) : (2013)
Article de journal
Weinberger, A.; Tsai, F.-C.; Koenderink, G.H.; Schmidt, T.F.; Itri, R.; Meier, W.; Schmatko, T.; Schroeder, A.; Marques, C.
Gel-Assisted Formation of Giant Unilamellar Vesicles
Dans : Biophysical Journal,105(1) : 154-164 (2013)
Article de journal



2012

Nam, G.-M.; Lee, N.-K.; Mohrbach, H.; Johner, A.; Kulic, I.M.
Helices at interfaces
Dans : Epl,100(2) : (2012)
Article de journal
Lee, N.-K.; Schmatko, T.; Muller, P.; Maaloum, M.; Johner, A.
Shape of adsorbed supercoiled plasmids: An equilibrium description
Dans : Physical Review E,85(5, 1) : (2012)
Article de journal
Mohrbach, H.; Kulic, I.M.
Solvable model for polymorphic dynamics of biofilaments
Dans : Physical Review E,85(3, 1) : (2012)
Article de journal
Mohrbach, H.; Johner, A.; Kulic, I.M.
Cooperative lattice dynamics and anomalous fluctuations of microtubules
Dans : European Biophysics Journal With Biophysics Letters,41(2) : 217-239 (2012)
Article de journal



2011

Thalmann, F.; Billot, V.; Marques, C.M.
Lipid bilayer adhesion on sparse DNA carpets: Theoretical analysis of membrane deformations induced by single-end-grafted polymers
Dans : Physical Review E,83(6, 1) : (2011)
Article de journal
Wolff, J.; Marques, C.M.; Thalmann, F.
Thermodynamic Approach to Phase Coexistence in Ternary Phospholipid-Cholesterol Mixtures
Dans : Physical Review Letters,106(12) : (2011)
Article de journal



2010

Mohrbach, H.; Johner, A.; Kulic, I.M.
Tubulin Bistability and Polymorphic Dynamics of Microtubules
Dans : Physical Review Letters,105(26) : (2010)
Article de journal
Mendoza, C.I.; Marques, C.M.; Thalmann, F.
Enhanced shear separation for chiral magnetic colloidal aggregates
Dans : Physical Review E,82(6, 1) : (2010)
Article de journal
Nam, G.; Hisette, M.L.; Sun, Y.L.; Gisler, T.; Johner, A.; Thalmann, F.; Schroeder, A.P.; Marques, C.M.; Lee, N.-K.
Scraping and Stapling of End-Grafted DNA Chains by a Bioadhesive Spreading Vesicle to Reveal Chain Internal Friction and Topological Complexity
Dans : Physical Review Letters,105(8) : (2010)
Article de journal
Arnold, C.; Thalmann, F.; Marques, C.; Marie, P.; Holl, Y.
Surfactant Distribution in Waterborne Acrylic Films. 1. Bulk Investigation
Dans : Journal Of Physical Chemistry B,114(28) : 9135-9147 (2010)
Article de journal
Thalmann, F.
A schematic model for molecular affinity and binding with Ising variables
Dans : European Physical Journal E,31(4) : 441-454 (2010)
Article de journal
Sanchez, T.; Kulic, I.M.; Dogic, Z.
Circularization, Photomechanical Switching, and a Supercoiling Transition of Actin Filaments
Dans : Physical Review Letters,104(9) : (2010)
Article de journal



2009

Thalmann, F.; Lee, N.-K.
Fast algorithms for classical X -> 0 diffusion-reaction processes
Dans : Journal Of Chemical Physics,130(7) : (2009)
Article de journal



2008

Cohen-Tannoudji, L.; Bertrand, E.; Baudry, J.; Robic, C.; Goubault, C.; Pellissier, M.; Johner, A.; Thalmann, F.; Lee, N.K.; Marques, C.M.; Bibette, J.
Measuring the kinetics of biomolecular recognition with magnetic colloids
Dans : Physical Review Letters,100(10) : (2008)
Article de journal
Geerts, N.; Schmatko, T.; Eiser, E.
Clustering versus percolation in the assembly of colloids coated with long DNA
Dans : Langmuir,24(9) : 5118-5123 (2008)
Article de journal



2007

Thalmann, F.; Farago, J.
Trotter derivation of algorithms for Brownian and dissipative particle dynamics
Dans : Journal Of Chemical Physics,127(12) : (2007)
Article de journal
Baulin, V.A.; Marques, C.M.; Thalmann, F.
Collision induced spatial organization of microtubules
Dans : Biophysical Chemistry,128(2-3) : 231-244 (2007)
Article de journal